eLxr packagesPaket: changeo (1.3.0-1)
Links für changeo
Quellcode-Paket changeo herunterladen:
- [changeo_1.3.0-1.debian.tar.xz]
- [changeo_1.3.0-1.dsc]
- [changeo_1.3.0.orig-debian-tests-data.tar.gz]
- [changeo_1.3.0.orig.tar.gz]
Betreuer:
Externe Ressourcen:
- Homepage [changeo.readthedocs.io]
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Repertoire clonal assignment toolkit (Python 3)
Change-O is a collection of tools for processing the output of V(D)J alignment tools, assigning clonal clusters to immunoglobulin (Ig) sequences, and reconstructing germline sequences.
Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of Ig repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. Change-O is a suite of utilities to facilitate advanced analysis of Ig and TCR sequences following germline segment assignment. Change-O handles output from IMGT/HighV-QUEST and IgBLAST, and provides a wide variety of clustering methods for assigning clonal groups to Ig sequences. Record sorting, grouping, and various database manipulation operations are also included.
This package installs the library for Python 3.
Andere Pakete mit Bezug zu changeo
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-airr
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- dep: python3-biopython
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pandas
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- dep: python3-pkg-resources
- Package Discovery and Resource Access using pkg_resources
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- dep: python3-presto
- Paket nicht verfügbar
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: python3-yaml
- YAML parser and emitter for Python3
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- rec: python3-presto (>= 0.6.2)
- Paket nicht verfügbar
changeo herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 105,4 kB | 701,0 kB | [Liste der Dateien] |