eLxr packages [ bianca ]
[ Quellcode: kissplice ]
Paket: kissplice (2.6.7-2)
Links für kissplice
Quellcode-Paket kissplice herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [kissplice.prabi.fr]
Ähnliche Pakete:
Detection of various kinds of polymorphisms in RNA-seq data
KisSplice is a piece of software that enables the analysis of RNA-seq data with or without a reference genome. It is an exact local transcriptome assembler that allows one to identify SNPs, indels and alternative splicing events. It can deal with an arbitrary number of biological conditions, and will quantify each variant in each condition. It has been tested on Illumina datasets of up to 1G reads. Its memory consumption is around 5Gb for 100M reads.
Andere Pakete mit Bezug zu kissplice
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- dep: bcalm
- de Bruijn compaction in low memory
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- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
kissplice herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 485,3 kB | 1.178,0 kB | [Liste der Dateien] |