eLxr packages [ bianca ]
[ Quellcode: gbrowse ]
Paket: gbrowse (2.56+dfsg-12)
Links für gbrowse
Quellcode-Paket gbrowse herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [gmod.org]
Ähnliche Pakete:
GMOD Generic Genome Browser
Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). Some of its features:
* Simultaneous bird's eye and detailed views of the genome; * Scroll, zoom, center; * Attach arbitrary URLs to any annotation; * Order and appearance of tracks are customizable by administrator and end-user; * Search by annotation ID, name, or comment; * Supports third party annotation using GFF formats; * Settings persist across sessions; * DNA and GFF dumps; * Connectivity to different databases, including BioSQL and Chado; * Multi-language support; * Third-party feature loading; * Customizable plug-in architecture (e.g. run BLAST, dump & import many formats, find oligonucleotides, design primers, create restriction maps, edit features).
Andere Pakete mit Bezug zu gbrowse
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- dep: bioperl
- Perl tools for computational molecular biology
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- dep: libbio-coordinate-perl
- BioPerl modules for working with biological coordinates
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- dep: libbio-db-seqfeature-perl
- Normalized feature for use with Bio::DB::SeqFeature::Store
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- dep: libbio-graphics-perl
- Generate GD images of Bio::Seq objects
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- dep: libcgi-session-perl
- persistent session data in CGI applications
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- dep: libdbd-sqlite3-perl
- Perl DBI driver with a self-contained RDBMS
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- dep: libgd-gd2-noxpm-perl
- virtuelles Paket, bereitgestellt durch libgd-perl
- oder libgd-gd2-perl
- virtuelles Paket, bereitgestellt durch libgd-perl
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- dep: libhttp-daemon-perl
- simple http server class
-
- dep: libio-string-perl
- Emulate IO::File interface for in-core strings
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- dep: libjs-prototype
- JavaScript Framework for dynamic web applications
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- dep: libjs-scriptaculous
- JavaScript library for dynamic web applications
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- dep: libjson-perl
- module for manipulating JSON-formatted data
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- dep: libstatistics-descriptive-perl
- Perl module for basic descriptive statistical functions
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- dep: libterm-readkey-perl
- perl module for simple terminal control
-
- dep: libvm-ec2-perl
- module providing controls on Amazon EC2 and Eucalyptus
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- dep: libwww-perl
- simple and consistent interface to the world-wide web
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: sqlite3
- Command line interface for SQLite 3
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- sug: gbrowse-calign
- CAlign helper
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- sug: gbrowse-data
- Sample data to use GBrowse
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- sug: libfile-nfslock-perl
- perl module to do NFS (or not) locking
gbrowse herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 2.317,7 kB | 7.017,0 kB | [Liste der Dateien] |