Paket: libhts3t64 (1.21+ds-1)

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C library for high-throughput sequencing data formats

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

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dep: libbz2-1.0

high-quality block-sorting file compressor library - runtime
dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
dep: libcurl3t64-gnutls (>= 7.18.0)

easy-to-use client-side URL transfer library (GnuTLS flavour)
dep: libdeflate0 (>= 1.0)

fast, whole-buffer DEFLATE-based compression and decompression
dep: libhtscodecs2 (>= 1.3.0)

Custom compression for CRAM and others
dep: liblzma5 (>= 5.1.1alpha+20120614)

XZ-format compression library
dep: libssl3t64 (>= 3.0.0)

Secure Sockets Layer toolkit - shared libraries
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

libhts3t64 herunterladen

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