Paket: mecat2 (0.0+git20200428.f54c542+ds-4)

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Quellcode-Paket mecat2 herunterladen:

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Externe Ressourcen:

Homepage [github.com]

ultra-fast and accurate de novo assembly tools for SMRT reads

An improved version of MECAT. It is an ultra-fast and accurate mapping and error correcting de novo assembly tools for single molecula sequencing (SMRT) reads. MECAT2 consists of the following three modules:

 1. mecat2map: a fast and accurate alignment tool for SMRT reads.
 2. mecat2cns: correct noisy reads based on their pairwise overlaps.
 3. fsa: a string graph based assembly tool.

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dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libgomp1 (>= 4.9)

GCC OpenMP (GOMP) support library
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

mecat2 herunterladen

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