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[ Quellcode: r-cran-spp ]
Paket: r-cran-spp (1.16.0-2 und andere)
Links für r-cran-spp
Quellcode-Paket r-cran-spp herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [cran.r-project.org]
Ähnliche Pakete:
GNU R ChIP-seq processing pipeline
R package for anlaysis of ChIP-seq and other functional sequencing data
* Assess overall DNA-binding signals in the data and select appropriate quality of tag alignment. * Discard or restrict positions with abnormally high number of tags. * Calculate genome-wide profiles of smoothed tag density and save them in WIG files for viewing in other browsers. * Calculate genome-wide profiles providing conservative statistical estimates of fold enrichment ratios along the genome. These can be exported for browser viewing, or thresholded to determine regions of significant enrichment/depletion. * Determine statistically significant point binding positions * Assess whether the set of point binding positions detected at a current sequencing depth meets saturation criteria, and if does not, estimate what sequencing depth would be required to do so.
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r-cran-spp herunterladen
| Architektur | Version | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|---|
| amd64 | 1.16.0-2 | 315,3 kB | 453,0 kB | [Liste der Dateien] |
| arm64 | 1.16.0-2+b1 | 315,1 kB | 436,0 kB | [Liste der Dateien] |