Paket: tvc (5.0.3+git20151221.80e144e+dfsg-5 und andere)

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Quellcode-Paket tvc herunterladen:

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Homepage [ioncommunity.thermofisher.com]

genetic variant caller for Ion Torrent sequencing platforms

Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions.

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dep: libarmadillo14 (>= 1:14.0.1+dfsg) [amd64]

streamlined C++ linear algebra library

dep: libarmadillo14 (>= 1:14.2.3+dfsg) [arm64]
dep: libbamtools2.5.2 (>= 2.5.2+dfsg)

dynamic library for manipulating BAM (genome alignment) files
dep: libc6 (>= 2.38)

GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
dep: libdisorder0 (>= 0.0.2)

library for entropy measurement of byte streams
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libjsoncpp26 (>= 1.9.6)

library for reading and writing JSON for C++
dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

determine similar regions between two strings or genomic sequences (lib)
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

tvc herunterladen

Download für alle verfügbaren Architekturen
Architektur	Version	Paketgröße	Größe (installiert)	Dateien
amd64	5.0.3+git20151221.80e144e+dfsg-5+b3	1.088,5 kB	3.505,0 kB	[Liste der Dateien]
arm64	5.0.3+git20151221.80e144e+dfsg-5+b4	993,8 kB	3.349,0 kB	[Liste der Dateien]