eLxr packagesPaketti: changeo (1.3.0-1)
Links for changeo
Imuroi lähdekoodipaketti changeo:
- [changeo_1.3.0-1.debian.tar.xz]
- [changeo_1.3.0-1.dsc]
- [changeo_1.3.0.orig-debian-tests-data.tar.gz]
- [changeo_1.3.0.orig.tar.gz]
Ylläpitäjät:
External Resources:
- Kotisivu [changeo.readthedocs.io]
Samankaltaisia paketteja:
Repertoire clonal assignment toolkit (Python 3)
Change-O is a collection of tools for processing the output of V(D)J alignment tools, assigning clonal clusters to immunoglobulin (Ig) sequences, and reconstructing germline sequences.
Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of Ig repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. Change-O is a suite of utilities to facilitate advanced analysis of Ig and TCR sequences following germline segment assignment. Change-O handles output from IMGT/HighV-QUEST and IgBLAST, and provides a wide variety of clustering methods for assigning clonal groups to Ig sequences. Record sorting, grouping, and various database manipulation operations are also included.
This package installs the library for Python 3.
Muut pakettiin changeo liittyvät paketit
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-airr
- Paketti ei saatavilla
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- dep: python3-biopython
- Paketti ei saatavilla
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pandas
- Paketti ei saatavilla
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- dep: python3-pkg-resources
- Package Discovery and Resource Access using pkg_resources
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- dep: python3-presto
- Paketti ei saatavilla
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: python3-yaml
- YAML parser and emitter for Python3
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- rec: python3-presto (>= 0.6.2)
- Paketti ei saatavilla
Imuroi changeo
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| all | 105.4 kt | 701.0 kt | [tiedostoluettelo] |