Paketti: libbifrost0 (1.3.1-1)

Links for libbifrost0

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Imuroi lähdekoodipaketti bifrost:

Ylläpitäjät:

External Resources:

Kotisivu [github.com]

Samankaltaisia paketteja:

library for parallel construction, indexing and querying of de Bruijn graphs

Libbifrost is the shared library for the command-line tool bifrost for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.

 * Build, index, color and query the compacted de Bruijn graph
 * No need to build the uncompacted de Bruijn graph
 * Reads or assembled genomes as input
 * Output graph in GFA (can be visualized with Bandage), FASTA or binary
 * Graph cleaning: short tip clipping, etc.
 * Multi-threaded
 * No parameters to estimate with other tools
 * Exact or approximate k-mer search of queries

Muut pakettiin libbifrost0 liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgcc-s1 (>= 3.4)

GCC support library
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

Imuroi libbifrost0

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Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	417.9 kt	1,436.0 kt	[tiedostoluettelo]