Paketti: tabix (1.21+ds-1)

Links for tabix

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Imuroi lähdekoodipaketti htslib:

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External Resources:

Kotisivu [github.com]

Samankaltaisia paketteja:

generic indexer for TAB-delimited genome position files

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.

Muut pakettiin tabix liittyvät paketit

depends

recommends

suggests

enhances

dep: libbz2-1.0

high-quality block-sorting file compressor library - runtime
dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libdeflate0 (>= 1.0)

fast, whole-buffer DEFLATE-based compression and decompression
dep: libhtscodecs2 (>= 1.3.0)

Custom compression for CRAM and others
dep: liblzma5 (>= 5.1.1alpha+20120614)

XZ-format compression library
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

Imuroi tabix

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Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	484.1 kt	2,328.0 kt	[tiedostoluettelo]