Paketti: topp (2.6.0+cleaned1-4 ja muut)

Links for topp

eLxr Patch Tracker

Imuroi lähdekoodipaketti openms:

Ylläpitäjät:

External Resources:

Kotisivu [www.openms.de]

Samankaltaisia paketteja:

set of programs implementing The OpenMS Proteomic Pipeline

TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :

  - TOPPView: A viewer for mass spectrometry data.
  - TOPPAS: An assistant for GUI-driven TOPP workflow design.
  - DTAExtractor: Extracts spectra of an MS run file to several
    files in DTA format.
  - FileConverter:  Converts between different MS file formats.
  - FileFilter: Extracts or manipulates portions of data from peak,
    feature or consensus feature files.
  - SpectraMerger: Merges spectra from an LC/MS map, either by
    precursor or by RT blocks.
  - BaselineFilter: Removes the baseline from profile spectra using a
    top-hat filter.
  - InternalCalibration: Applies an internal calibration.
  - PTModel: Trains a model for the prediction of proteotypic
    peptides from a training set.
  - RTPredict: Predicts retention times for peptides using a model
    trained by RTModel.
  - ExecutePipeline: Executes workflows created by TOPPAS.

Muut pakettiin topp liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.38)

GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libopenms2.6.0 (= 2.6.0+cleaned1-4+b5)

library for LC/MS data management and analysis - runtime
dep: libqt5core5t64 (>= 5.15.1)

Qt 5 core module
dep: libqt5gui5t64 (>= 5.11.3)

Qt 5 GUI module

tai libqt5gui5-gles (>= 5.11.3)

Qt 5 GUI module — OpenGL ES variant
dep: libqt5widgets5t64 (>= 5.11.3)

Qt 5 widgets module
dep: libstdc++6 (>= 14)

GNU Standard C++ Library v3
dep: libxerces-c3.2t64

validating XML parser library for C++
dep: openms-common (= 2.6.0+cleaned1-4)

package for LC/MS data management and analysis - shared data

sug: openms-doc

package for LC/MS data management and analysis - documentation

Imuroi topp

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	2.6.0+cleaned1-4+b5	3,139.1 kt	17,386.0 kt	[tiedostoluettelo]