Paketti: scoary (1.6.16-10)

Links for scoary

eLxr Patch Tracker

Imuroi lähdekoodipaketti scoary:

[scoary_1.6.16-10.debian.tar.xz]
[scoary_1.6.16-10.dsc]
[scoary_1.6.16.orig.tar.gz]

Ylläpitäjät:

Debian Med Packaging Team
Andreas Tille
Étienne Mollier

External Resources:

Kotisivu [github.com]

Samankaltaisia paketteja:

roary
pique
tnseq-transit
gemma
gwama
bolt-lmm
kaptive
kaptive-example
kaptive-data
r-cran-ranger
python3-htseq

pangenome-wide association studies

Scoary is designed to take the gene_presence_absence.csv file from Roary as well as a traits file created by the user and calculate the associations between all genes in the accessory genome and the traits. It reports a list of genes sorted by strength of association per trait.

Muut pakettiin scoary liittyvät paketit

depends

recommends

suggests

enhances

dep: python3

interactive high-level object-oriented language (default python3 version)

dep: python3 (>= 3.2)
dep: python3-scipy

scientific tools for Python 3

sug: roary

high speed stand alone pan genome pipeline

Imuroi scoary

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	229.9 kt	2,686.0 kt	[tiedostoluettelo]