Paquet : topp (2.6.0+cleaned1-4 et autres)

Liens pour topp

Suivis des correctifs pour eLxr

Télécharger le paquet source openms :

Responsables :

Ressources externes :

Page d'accueil [www.openms.de]

Paquets similaires :

set of programs implementing The OpenMS Proteomic Pipeline

TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :

  - TOPPView: A viewer for mass spectrometry data.
  - TOPPAS: An assistant for GUI-driven TOPP workflow design.
  - DTAExtractor: Extracts spectra of an MS run file to several
    files in DTA format.
  - FileConverter:  Converts between different MS file formats.
  - FileFilter: Extracts or manipulates portions of data from peak,
    feature or consensus feature files.
  - SpectraMerger: Merges spectra from an LC/MS map, either by
    precursor or by RT blocks.
  - BaselineFilter: Removes the baseline from profile spectra using a
    top-hat filter.
  - InternalCalibration: Applies an internal calibration.
  - PTModel: Trains a model for the prediction of proteotypic
    peptides from a training set.
  - RTPredict: Predicts retention times for peptides using a model
    trained by RTModel.
  - ExecutePipeline: Executes workflows created by TOPPAS.

Autres paquets associés à topp

dépendances

recommandations

suggestions

enhances

dep: libc6 (>= 2.38)

GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libopenms2.6.0 (= 2.6.0+cleaned1-4+b5)

library for LC/MS data management and analysis - runtime
dep: libqt5core5t64 (>= 5.11.3)

Qt 5 core module
dep: libqt5gui5t64 (>= 5.11.3)

Qt 5 GUI module

ou libqt5gui5-gles (>= 5.11.3)

Qt 5 GUI module — OpenGL ES variant
dep: libqt5widgets5t64 (>= 5.11.3)

Qt 5 widgets module
dep: libstdc++6 (>= 14)

GNU Standard C++ Library v3
dep: libxerces-c3.2t64

validating XML parser library for C++
dep: openms-common (= 2.6.0+cleaned1-4)

package for LC/MS data management and analysis - shared data

sug: openms-doc

package for LC/MS data management and analysis - documentation

Télécharger topp

Télécharger pour toutes les architectures proposées
Architecture	Version	Taille du paquet	Espace occupé une fois installé	Fichiers
arm64	2.6.0+cleaned1-4+b5	2 769,6 ko	20 673,0 ko	[liste des fichiers]