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[ Paquet source : kissplice ]
Paquet : kissplice (2.6.7-2)
Liens pour kissplice
Télécharger le paquet source kissplice :
Responsables :
Ressources externes :
- Page d'accueil [kissplice.prabi.fr]
Paquets similaires :
Detection of various kinds of polymorphisms in RNA-seq data
KisSplice is a piece of software that enables the analysis of RNA-seq data with or without a reference genome. It is an exact local transcriptome assembler that allows one to identify SNPs, indels and alternative splicing events. It can deal with an arbitrary number of biological conditions, and will quantify each variant in each condition. It has been tested on Illumina datasets of up to 1G reads. Its memory consumption is around 5Gb for 100M reads.
Autres paquets associés à kissplice
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- dep: bcalm
- de Bruijn compaction in low memory
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- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
-
- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Télécharger kissplice
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 485,3 ko | 1 178,0 ko | [liste des fichiers] |
| arm64 | 470,1 ko | 1 370,0 ko | [liste des fichiers] |