Paquet : mafft (7.505-1 et autres)

Liens pour mafft

Suivis des correctifs pour eLxr

Télécharger le paquet source mafft :

Responsables :

Ressources externes :

Page d'accueil [mafft.cbrc.jp]

Paquets similaires :

Multiple alignment program for amino acid or nucleotide sequences

MAFFT is a multiple sequence alignment program which offers three accuracy-oriented methods:

 * L-INS-i (probably most accurate; recommended for <200 sequences;
   iterative refinement method incorporating local pairwise alignment
   information),
 * G-INS-i (suitable for sequences of similar lengths; recommended for
   <200 sequences; iterative refinement method incorporating global
   pairwise alignment information),
 * E-INS-i (suitable for sequences containing large unalignable regions;
   recommended for <200 sequences),

and five speed-oriented methods:

 * FFT-NS-i (iterative refinement method; two cycles only),
 * FFT-NS-i (iterative refinement method; max. 1000 iterations),
 * FFT-NS-2 (fast; progressive method),
 * FFT-NS-1 (very fast; recommended for >2000 sequences; progressive
   method with a rough guide tree),
 * NW-NS-PartTree-1 (recommended for ∼50,000 sequences; progressive
   method with the PartTree algorithm).

Autres paquets associés à mafft

dépendances

recommandations

suggestions

enhances

dep: libc6 (>= 2.29) [amd64]

GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb

dep: libc6 (>= 2.34) [arm64]
dep: perl

Larry Wall's Practical Extraction and Report Language

rec: blast2

Paquet indisponible
rec: libwww-perl

simple and consistent interface to the world-wide web
rec: lynx

classic non-graphical (text-mode) web browser
rec: ruby

Interpreter of object-oriented scripting language Ruby (default version)

enh: t-coffee

Multiple Sequence Alignment

Télécharger mafft

Télécharger pour toutes les architectures proposées
Architecture	Version	Taille du paquet	Espace occupé une fois installé	Fichiers
amd64	7.505-1	1 052,5 ko	11 920,0 ko	[liste des fichiers]
arm64	7.505-1+b1	937,9 ko	12 408,0 ko	[liste des fichiers]