Paquet : mummer (3.23+dfsg-8 et autres)

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Ressources externes :

Page d'accueil [mummer.sourceforge.net]

Paquets similaires :

Efficient sequence alignment of full genomes

MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it handles the 100s or 1000s of contigs from a shotgun sequencing project with ease, and will align them to another set of contigs or a genome using the NUCmer program included with the system. If the species are too divergent for DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences.

Autres paquets associés à mummer

dépendances

recommandations

suggestions

enhances

dep: gawk

GNU awk, a pattern scanning and processing language
dep: libc6 (>= 2.34) [amd64]

GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb

dep: libc6 (>= 2.38) [arm64]
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libstdc++6 (>= 11) [amd64]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 13.1) [arm64]
dep: perl

Larry Wall's Practical Extraction and Report Language

Télécharger mummer

Télécharger pour toutes les architectures proposées
Architecture	Version	Taille du paquet	Espace occupé une fois installé	Fichiers
amd64	3.23+dfsg-8	646,2 ko	3 307,0 ko	[liste des fichiers]
arm64	3.23+dfsg-8+b2	627,9 ko	3 827,0 ko	[liste des fichiers]