eLxr packages [ bianca ]
[ Source: abyss ]
Package: abyss (2.3.10-1 and others)
Links for abyss
Download Source Package abyss:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
de novo, parallel, sequence assembler for short reads
ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.
Other Packages Related to abyss
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- dep: bsdextrautils
- extra utilities from 4.4BSD-Lite
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- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: libopenmpi40 (>= 5.0.6)
- high performance message passing library -- shared library
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- dep: libsqlite3-0 (>= 3.5.9)
- SQLite 3 shared library
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- dep: libstdc++6 (>= 14)
- GNU Standard C++ Library v3
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- dep: make
- utility for directing compilation
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- dep: openmpi-bin
- high performance message passing library -- binaries
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- dep: openmpi-common
- high performance message passing library -- common files
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
Download abyss
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| amd64 | 2.3.10-1+b1 | 3,246.5 kB | 10,021.0 kB | [list of files] |
| arm64 | 2.3.10-1+b1 | 3,000.6 kB | 10,681.0 kB | [list of files] |