eLxr packages [ bianca ]
[ ソース: phybin ]
パッケージ: phybin (0.3-6)
binning/clustering newick trees by topology
PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.
It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.
phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).
その他の phybin 関連パッケージ
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libffi8 (>= 3.4)
- Foreign Function Interface library runtime
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- dep: libgmp10 (>= 2:6.2.1+dfsg1)
- Multiprecision arithmetic library