eLxr packages [ bianca ]
[ ソース: vt ]
パッケージ: vt (0.57721+ds-3 など)
toolset for short variant discovery in genetic sequence data
vt is a variant tool set that discovers short variants from Next Generation Sequencing data.
Vt-normalize is a tool to normalize representation of genetic variants in the VCF. Variant normalization is formally defined as the consistent representation of genetic variants in an unambiguous and concise way. In vt a simple general algorithm to enforce this is implemented.
その他の vt 関連パッケージ
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
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- dep: libpcre2-8-0 (>= 10.22)
- New Perl Compatible Regular Expression Library- 8 bit runtime files
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: r-base-core
- GNU R core of statistical computation and graphics system