eLxr packages [ bianca ]
[ ソース: ltrsift ]
パッケージ: ltrsift (1.0.2-10 など)
postprocessing and classification of LTR retrotransposons
LTRsift is a graphical desktop tool for semi-automatic postprocessing of de novo predicted LTR retrotransposon annotations, such as the ones generated by LTRharvest and LTRdigest. Its user-friendly interface displays LTR retrotransposon candidates, their putative families and their internal structure in a hierarchical fashion, allowing the user to "sift" through the sometimes large results of de novo prediction software. It also offers customizable filtering and classification functionality.
その他の ltrsift 関連パッケージ
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libcairo2 (>= 1.2.4)
- Cairo 2D vector graphics library
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- dep: libgdk-pixbuf-2.0-0 (>= 2.22.0)
- GDK Pixbuf library
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- dep: libgenometools0t64 (>= 1.6.5+ds)
- versatile genome analysis library
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- dep: libglib2.0-0t64 (>= 2.75.3) [amd64]
- GLib library of C routines
- dep: libglib2.0-0t64 (>= 2.76.0) [arm64]
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- dep: libgtk2.0-0t64 (>= 2.18.0)
- GTK graphical user interface library - old version
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- dep: libpango-1.0-0 (>= 1.14.0)
- Layout and rendering of internationalized text
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- rec: last-align
- genome-scale comparison of biological sequences
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- rec: ncbi-blast+
- next generation suite of BLAST sequence search tools