eLxr packages [ bianca ]
[ ソース: r-cran-bio3d ]
パッケージ: r-cran-bio3d (2.4-5-1)
r-cran-bio3d に関するリンク
r-cran-bio3d ソースパッケージをダウンロード:
メンテナ:
外部の資源:
- ホームページ [cran.r-project.org]
類似のパッケージ:
GNU R package for biological structure analysis
The bio3d package contains utilities to process, organize and explore protein structure, sequence and dynamics data. Features include the ability to read and write structure, sequence and dynamic trajectory data, perform atom summaries, atom selection, re-orientation, superposition, rigid core identification, clustering, torsion analysis, distance matrix analysis, structure and sequence conservation analysis, and principal component analysis (PCA). In addition, various utility functions are provided to enable the statistical and graphical power of the R environment to work with biological sequence and structural data.
その他の r-cran-bio3d 関連パッケージ
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- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libstdc++6 (>= 14)
- GNU Standard C++ Library v3
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- dep: r-api-4.0
- 以下のパッケージによって提供される仮想パッケージです: r-base-core
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- dep: r-cran-rcpp
- GNU R package for Seamless R and C++ Integration
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
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- rec: clustalo
- General-purpose multiple sequence alignment program for proteins
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- rec: dssp
- protein secondary structure assignment based on 3D structure
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- rec: muscle
- Multiple alignment program of protein sequences
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- rec: mustang
- multiple structural alignment of proteins
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- rec: r-bioc-biostrings
- GNU R string objects representing biological sequences
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- rec: r-cran-bigmemory
- Manage Massive Matrices with Shared Memory and Memory-Mapped Files
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- rec: r-cran-httr
- GNU R tools for working with URLs and HTTP
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- rec: r-cran-igraph
- GNU R network analysis and visualization
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- rec: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- rec: r-cran-lattice
- GNU R package for 'Trellis' graphics
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- rec: r-cran-ncdf4
- GNU R interface to Unidata netCDF format data files
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- rec: r-cran-rcurl
- GNU R General network (HTTP/FTP/...) client interface
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- rec: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- rec: r-cran-testthat (>= 0.9.1)
- GNU R testsuite
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- rec: r-cran-xml
- GNU R package for XML parsing and generation