Pakiety oprogramowania w gałęzi "aria", Podsekcja science

3depict (0.0.23-2)

visualisation and analysis for single valued point data

abacas (1.3.1-9)

close gaps in genomic alignments from short reads

abacas-examples (1.3.1-9)

sample data for abacas to close gaps in genomic alignments

abinit (9.6.2-1)

package for electronic structure calculations

abinit-data (9.6.2-1)

package for electronic structure calculations (Data files)

abpoa (1.4.1-3+b4)

adaptive banded Partial Order Alignment

abyss (2.3.5+dfsg-2)

de novo, parallel, sequence assembler for short reads

acedb-other (4.9.39+dfsg.02-7+b1)

retrieval of DNA or protein sequences

aces3 (3.0.8-9)

Advanced Concepts in Electronic Structure III

aces3-data (3.0.8-9)

Advanced Concepts in Electronic Structure III

achilles (2-12)

Artificial life and evolution simulator

adapterremoval (2.3.3-2)

rapid adapter trimming, identification, and read merging of gene sequences

adapterremoval-examples (2.3.3-2)

rapid adapter trimming, identification, and read merging (example data)

adms (2.3.7-1)

Automatic device model synthesizer for Verilog-AMS

adun-core (0.81-14+b3)

Molecular Simulator

adun.app (0.81-14+b3)

Molecular Simulator for GNUstep (GUI)

aegean (0.16.0+dfsg-2)

integrated genome analysis toolkit

aeskulap (0.2.2-beta2+git20190406.ef77f01-4+b1)

medical image viewer and DICOM network client

aevol (5.0+ds-3+b1)

digital genetics model to run Evolution Experiments in silico

aghermann (1.1.2-3+b3)

Sleep-research experiment manager

aladin (12.001+dfsg-1)

Interactive sky atlas for astronomical images and datasets

alfa (2.2-1+b1)

Automated Line Fitting Algorithm

algotutor (0.8.6-6)

program for observing the intermediate steps of algorithm

alien-hunter (1.7-10)

Interpolated Variable Order Motifs to identify horizontally acquired DNA

allelecount (4.3.0-2)

NGS copy number algorithms

altree (1.3.2-1+b3)

program to perform phylogeny-based association and localization analysis

altree-examples (1.3.2-1)

example files for ALTree

amap-align (2.2+git20080214.600fc29+dfsg-2)

Protein multiple alignment by sequence annealing

ampliconnoise (1.29-10+b2)

removal of noise from 454 sequenced PCR amplicons

andi (0.14-2)

Efficient Estimation of Evolutionary Distances

any2fasta (0.4.2-2)

convert various sequence formats to FASTA

any2fasta-examples (0.4.2-2)

convert various sequence formats to FASTA (example data)

aoflagger (3.1.0-2+b5)

Find RFI in radio astronomical observations

apbs (3.4.1-5)

Adaptive Poisson Boltzmann Solver

apbs-data (3.4.1-5)

data files for APBS (Adaptive Poisson Boltzmann Solver)

apbs-doc (3.4.1-5)

Adaptive Poisson Boltzmann Solver

apertium (3.8.3-1+b2)

Shallow-transfer machine translation engine

apertium-afr-nld (0.3.0-3)

Apertium translation data for the Afrikaans-Dutch pair

apertium-all-dev (3.8.1-2)

Metapackage for all tools required for Apertium development

apertium-anaphora (1.1.1-1+b1)

Anaphora resolution module for Apertium

apertium-apy (0.11.7-2.1)

Apertium APY service

apertium-arg-cat (0.2.0-3)

Apertium translation data for the Aragonese-Catalan pair

apertium-bel-rus (0.2.1-2)

Apertium translation data for the Belarusian-Russian pair

apertium-br-fr (0.5.1-1)

Apertium linguistic data to translate between Breton and French

apertium-cat-ita (0.2.2-1)

Apertium translation data for the Catalan-Italian pair

apertium-cat-srd (1.1.0-2)

Apertium translation data for the Catalan-Sardinian pair

apertium-dan-nor (1.5.0-2)

Apertium translation data for the Danish-Norwegian pair

apertium-dev (3.8.3-1+b2)

Development tools and library for Apertium

apertium-en-gl (0.5.4-1)

Apertium translation data for the English-Galician pair

apertium-eng-cat (1.0.1-5)

Apertium translation data for the English-Catalan pair

apertium-eng-spa (0.8.1-2)

Apertium translation data for the English-Spanish pair

apertium-eo-ca (1:0.9.2-1)

Apertium translation data for the Esperanto-Catalan pair

apertium-eo-en (1.0.2-1)

Apertium linguistic data to translate between Esperanto and English

apertium-eo-es (1:0.9.2-1)

Apertium translation data for the Esperanto-Spanish pair

apertium-eo-fr (0.9.1-1)

Apertium translation data for the Esperanto-French pair

apertium-es-gl (1.0.9-3)

Apertium translation data for the Spanish-Galician pair

apertium-es-pt (1.1.6-1)

Apertium translation data for the Spanish-Portuguese pair

apertium-es-ro (0.7.5-1)

Apertium translation data for the Spanish-Romanian pair

apertium-eu-en (0.3.3-1)

Apertium translation data for the Basque-English pair

apertium-eu-es (0.3.4-1)

Apertium translation data for the Basque-Spanish pair

apertium-eval-translator (1.2.1-3)

Evaluate machine translation output against reference

apertium-fr-es (0.9.4-1)

Apertium translation data for the French-Spanish pair

apertium-fra-cat (1.10.0-1)

Apertium translation data for the French-Catalan pair

apertium-fra-frp (1.1.0-1)

Apertium translation data for the French-Arpitan pair

apertium-get (1.0.0-3)

Helper for Apertium and Giellatekno languages and pairs

apertium-hbs-eng (0.5.1-2)

Apertium translation data for the Serbo-Croatian - English pair

apertium-hbs-mkd (0.1.1-1)

Apertium translation data for the Serbo-Croatian-Macedonian pair

apertium-hbs-slv (0.5.1-2)

Apertium translation data for the Serbo-Croatian-Slovenian pair

apertium-hin (0.1.0~r59158-4)

Apertium single language data for Hindi

apertium-ind-zlm (0.1.2-3)

Apertium translation data for the Indonesian-Malay pair

apertium-isl-eng (0.1.2-1)

Apertium translation data for the Icelandic-English pair

apertium-isl-swe (0.1.1-2)

Apertium translation data for the Icelandic-Swedish pair

apertium-lex-tools (0.4.2-2)

Constraint-based lexical selection module

apertium-lex-tools-dev (0.4.2-2)

Development library for Apertium lexical selection module

apertium-mkd-bul (0.2.1-2)

Apertium translation data for the Macedonian-Bulgarian pair

apertium-mkd-eng (0.1.3-2)

Apertium translation data for the Macedonian-English pair

apertium-nno-nob (1.5.0-1)

Apertium translation data for the Norwegian Nynorsk-Norwegian Bokmål pair

apertium-oc-ca (1.0.7-1)

Apertium translation data for the Occitan-Catalan pair

apertium-oc-es (1.0.8-1)

Apertium translation data for the Occitan-Spanish pair

apertium-oci-fra (1.0.0-1)

Apertium translation data for the Occitan-French pair

apertium-pol-szl (0.2.1-3)

Apertium translation data for the Polish-Silesian pair

apertium-por-cat (0.10.1-2)

Apertium translation data for the Portuguese-Catalan pair

apertium-pt-gl (0.9.3-1)

Apertium translation data for the Portuguese-Galician pair

apertium-recursive (1.1.2-1+b1)

Apertium recursive structural transfer module

apertium-regtest (0.9.1-3)

Regression test suite for Apertium languages and pairs

apertium-rus-ukr (0.2.1-4)

Apertium translation data for the Russian-Ukrainian pair

apertium-separable (0.6.1-1+b1)

Reordering separable/discontiguous multiwords

apertium-spa-arg (0.5.0-2)

Apertium translation data for the Spanish-Aragonese pair

apertium-spa-ast (1.1.1-2)

Apertium translation data for the Spanish-Asturian pair

apertium-spa-ast

pakiet wirtualny udostępniany przez apertium-spa-ast

apertium-spa-cat (2.2.0-3)

Apertium translation data for the Spanish-Catalan pair

apertium-spa-ita (0.2.1-3)

Apertium translation data for the Spanish-Italian pair

apertium-srd-ita (1.1.0-2)

Apertium translation data for the Sardinian-Italian pair

apertium-swe-dan (0.8.1-3)

Apertium translation data for the Swedish-Danish pair

apertium-swe-nor (0.4.0-1)

Apertium translation data for the Swedish-Norwegian pair

apertium-urd (0.1.0~r61311-3)

Apertium single language data for Urdu

apertium-urd-hin (0.1.0~r64379-4)

Apertium translation data for the Urdu-Hindi pair

aragorn (1.2.38-4)

tRNA and tmRNA detection in nucleotide sequences

arden (1.0-5)

specificity control for read alignments using an artificial reference

ariba (2.14.6+ds-5+b1)

Antibiotic Resistance Identification By Assembly

art-nextgen-simulation-tools (20160605+dfsg-4+b3)

simulation tools to generate synthetic next-generation sequencing reads

art-nextgen-simulation-tools-profiles (20160605+dfsg-4)

profiles for art simulation tools

artemis (18.2.0+dfsg-3)

genome browser and annotation tool

artfastqgenerator (0.0.20150519-4)

outputs artificial FASTQ files derived from a reference genome

artfastqgenerator-examples (0.0.20150519-4)

outputs artificial FASTQ files derived from a reference genome (examples)

assembly-stats (1.0.1+ds-6)

get assembly statistics from FASTA and FASTQ files

assemblytics (1.2.1+dfsg-1)

detect and analyze structural variants from a genome assembly

astap (2022.12.09-1)

astrometric (plate) solver, stacking of images, photometry and FITS viewer

astap-cli (2022.12.09-1)

astrometric (plate) solver, command line version

astromatic (1.3)

Astronomical pipeline software collection

astrometry.net (0.93+dfsg-1+b1)

Astrometry plate solver

astronomical-almanac (5.6-7)

astronomical almanac - calculate planet and star positions

astropy-utils (5.2.1-2+deb12u1)

Command line tools from astropy

ataqv (1.3.0+ds-2)

ATAC-seq QC and visualization

atropos (1.1.31+dfsg-3+b3)

NGS read trimming tool that is specific, sensitive, and speedy

augur (20.0.0-1)

pipeline components for real-time virus analysis

augustus (3.5.0+dfsg-2)

gene prediction in eukaryotic genomes

augustus-data (3.5.0+dfsg-2)

data files for AUGUSTUS

autodock (4.2.6-9)

analysis of ligand binding to protein structure

autodock-getdata (4.2.6-9)

instructions for getData to collect compounds

autodock-test (4.2.6-9)

test files for AutoDock

autodock-vina (1.2.3-2)

docking of small molecules to proteins

autogrid (4.2.6-9)

pre-calculate binding of ligands to their receptor

autogrid-test (4.2.6-9)

test files for AutoGrid

avce00 (2.0.0-9)

Conversion of ESRI Arcinfo Vector Coverage in E00 format

avogadro (1.97.0-1)

Molecular Graphics and Modelling System

avogadro-utils (1.97.0-3+b1)

Molecular Graphics and Modelling System (library)

axe-demultiplexer (0.3.3+dfsg-3+b2)

Trie-based DNA sequencing read demultiplexer

bagel (1.2.2-6)

Computational Chemistry Package

baitfisher (1.2.7+git20211020.de26d5c+dfsg-1)

software package for designing hybrid enrichment probes

bali-phy (3.6.1+dfsg-1)

Bayesian Inference of Alignment and Phylogeny

ballview (1.5.0+git20180813.37fc53c-11)

free molecular modeling and molecular graphics tool

bamclipper (1.0.0-3)

Remove gene-specific primer sequences from SAM/BAM alignments

bamkit (0.0.1+git20170413.ccd079d-3)

tools for common BAM file manipulations

bamtools (2.5.2+dfsg-4)

toolkit for manipulating BAM (genome alignment) files

bandage (0.9.0-2)

Bioinformatics Application for Navigating De novo Assembly Graphs Easily

bandage-examples (0.9.0-2)

Bioinformatics Application for Navigating De novo Assembly Graphs Easily (data)

barrnap (0.9+dfsg-3)

rapid ribosomal RNA prediction

bart (0.8.00-3)

tools for computational magnetic resonance imaging

bart-view (0.2.00-1)

viewer for multi-dimensional complex-valued data

bbmap (39.01+dfsg-2)

BBTools genomic aligner and other tools for short sequences

bbmap-jni (39.01+dfsg-2)

short read aligner and other bioinformatic tools - JNI library

bcalm (2.2.3-4)

de Bruijn compaction in low memory

bcftools (1.16-1)

genomic variant calling and manipulation of VCF/BCF files

beads (1.1.22-1+b1)

2-DE electrophoresis gel image spot detection

beagle (220722-1)

Genotype calling, genotype phasing and imputation of ungenotyped markers

beast-mcmc (1.10.4+dfsg-5)

Bayesian MCMC phylogenetic inference

beast2-mcmc (2.7.3+dfsg-1)

Bayesian MCMC phylogenetic inference

bedops (2.4.41+dfsg-1)

high-performance genomic feature operations

bedtools (2.30.0+dfsg-3)

suite of utilities for comparing genomic features

bedtools-test (2.30.0+dfsg-3)

test data for the bedtools package

berkeley-express (1.5.3+dfsg-3+b1)

Streaming quantification for high-throughput sequencing

bio-eagle (2.4.1-3+b1)

Haplotype phasing within a genotyped cohort or using a phased reference panel

bio-eagle-examples (2.4.1-3)

Examples for bio-eagle

bio-rainbow (2.0.4+dfsg-2)

clustering and assembling short reads for bioinformatics

bio-vcf (0.9.5-3)

domain specific language (DSL) for processing the VCF format

bioawk (1.0-4+deb12u1)

extension of awk for biological sequence analysis

biobambam2 (2.0.185+ds-1)

tools for early stage alignment file processing

biogenesis (0.8-3.1)

artificial life program that simulates evolution of organisms

bioperl (1.7.8-1)

Perl tools for computational molecular biology

bioperl-run (1.7.3-9)

BioPerl wrappers: scripts

biosig-tools (2.5.0-1+b1)

format conversion tools for biomedical data formats

biosquid (1.9g+cvs20050121-12)

utilities for biological sequence analysis

biosyntax (1.0.0b-4)

Syntax Highlighting for Computational Biology (metapackage)

biosyntax-common (1.0.0b-4)

Syntax Highlighting for Computational Biology (common files)

biosyntax-example (1.0.0b-4)

Syntax Highlighting for Computational Biology (example)

biosyntax-gedit (1.0.0b-4)

Syntax Highlighting for Computational Biology (gedit)

biosyntax-less (1.0.0b-4)

Syntax Highlighting for Computational Biology (less)

biosyntax-vim (1.0.0b-4)

Syntax Highlighting for Computational Biology (vim)

bitseq (0.7.5+dfsg-6)

Bayesian Inference of Transcripts from Sequencing Data

bitwise (0.43-1+b1)

Interactive bitwise operation in ncurses

bkchem (0.14.0~pre4+git20211228-3)

Chemical structures editor

blasr (5.3.5+dfsg-6)

mapping single-molecule sequencing reads

bluebrain-hpc-coding-conventions (1.0.0+git20221201-2)

BlueBrain HPC Team C++ Development Guidelines

bmt (0.6-1.1)

software analysis benchmarking toolkit

bodr (10-2)

Blue Obelisk Data Repository

bolt-lmm (2.4.0+dfsg-1)

Efficient large cohorts genome-wide Bayesian mixed-model association testing

bolt-lmm-example (2.4.0+dfsg-1)

Examples for bolt-lmm

boolector (1.5.118.6b56be4.121013-1.3)

SMT solver for bit-vectors and arrays

bornagain (1.19.0-3+b5)

Simulate and fit X-ray and neutron GISAS -- binary

bowtie (1.3.1-1+b1)

Ultrafast memory-efficient short read aligner

bowtie-examples (1.3.1-1)

Examples for bowtie, the ultrafast memory-efficient short read aligner

bowtie2 (2.5.0-3+b2)

ultrafast memory-efficient short read aligner

bowtie2-examples (2.5.0-3)

Examples for bowtie2

boxshade (3.3.1-14)

Pretty-printing of multiple sequence alignments

bppphyview (0.6.1-4)

Bio++ Phylogenetic Viewer

bppsuite (2.4.1-6)

Bio++ program suite

bppsuite-examples (2.4.1-6)

Examples for Bio++ program suite

brig (0.95+dfsg-3)

BLAST Ring Image Generator

btllib-tools (1.4.10+dfsg-1)

Bioinformatics Technology Lab common code library tools

busco (5.4.4-1)

benchmarking sets of universal single-copy orthologs

bustools (0.42.0+dfsg-1)

program for manipulating BUS files for single cell RNA-Seq datasets

bwa (0.7.17-7+b2)

Burrows-Wheeler Aligner

c2x (2.40.e+ds-1)

converter between DFT electronic structure codes formats

cafeobj (1.6.0-2)

new generation algebraic specification and programming language

cafeobj-mode (1.6.0-2)

Emacs major mode for editing CafeOBJ source code

calculix-ccx (2.20-1)

Three-Dimensional Structural Finite Element Program

calculix-cgx (2.17+dfsg-2+b1)

Calculix cgx is a 3-dimensional pre- and post-processor for fem

callisto (1.1.0-2+b2)

Daemon for e-Callisto hardware

canu (2.0+dfsg-2+b1)

single molecule sequence assembler for genomes

casacore-data-igrf (12-1)

International Geomagnetic Reference Field data for casacore

casacore-data-jpl-de200 (2007.07.05+ds.1-1)

Jet Propulsion Laboratory Development Ephemeris DE200 for casacore

casacore-data-jpl-de405 (2007.07.05+ds.1-1)

Jet Propulsion Laboratory Development Ephemeris DE405 for casacore

casacore-data-lines (0+git2016.11.26-2.1)

Table of spectral line frequencies for casacore

casacore-data-observatories (0+git2018.12.08-2)

Table of radio observatory coordinates for casacore

casacore-data-sources (2-4)

Table of ICRF reference source coordinates for casacore

casacore-data-tai-utc (1.3)

Difference table between TAI and UTC for casacore

casacore-tools (3.5.0-2+b3)

Tools built with CASA

cassbeam (1.1-3)

Cassegrain antenna modelling

cassiopee (1.0.9-3+b2)

index and search tool in genomic sequences

cat-bat (5.2.3-2)

taxonomic classification of contigs and metagenome-assembled genomes (MAGs)

catfishq (1.4.0+ds-1)

concatenates fastq files

cba (0.3.6-6+b2)

Continuous Beam Analysis

cbflib-bin (0.9.7+dfsg1-2+b2)

utilities to manipulate CBF files

cclib (1.6.2-2)

Parsers and algorithms for computational chemistry

cct (1:1.0.3-1)

visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences

cct-examples (1:1.0.3-1)

example data for testing the package cct

cd-hit (4.8.1-4)

suite of programs designed to quickly group sequences

cdbfasta (1.00+git20181005.014498c+dfsg-4+b1)

Constant DataBase indexing and retrieval tools for multi-FASTA files

centrifuge (1.0.3-11)

rapid and memory-efficient system for classification of DNA sequences

cg3 (1.3.9-1+b2)

Tools for using the 3rd edition of Constraint Grammar (CG-3)

cg3-dev (1.3.9-1)

Metapackage providing both CG-3 CLI dev tools and dev library

cgview (0.0.20100111-7)

Circular Genome Viewer

changeo (1.3.0-1)

Repertoire clonal assignment toolkit (Python 3)

checkit-tiff (0.4.2-1)

conformance checker for baseline TIFFs

chemical-structures (2.2.dfsg.0-20)

web service providing molecular structures in open formats

chemical-structures-data (2.2.dfsg.0-20)

set of molecular structures in open formats

chemps2 (1.8.12-1+b1)

Executable to call libchemps2-3 from the command line

chemtool (1.6.14-6)

chemical structures drawing program

chip-seq (1.5.5-3)

tools performing common ChIP-Seq data analysis tasks

chip-seq-data (1.5.5-3)

tools performing common ChIP-Seq data analysis tasks (data)

chromhmm (1.24+dfsg-1)

Chromatin state discovery and characterization

chromimpute (1.0.3+dfsg-4)

Large-scale systematic epigenome imputation

cif-linguist (0.4.2-4)

transform CIF data among CIF formats and dialects

cif-tools (1.0.7-1)

Suite of tools to manipulate, validate and query mmCIF files

cif2hkl (1.4.2+ds1-1+b1 [amd64], 1.4.2+ds1-1 [arm64])

Convert crystallographic descriptions into HKL F^2 reflection lists

circlator (1.5.6-7)

circularize genome assemblies

circos (0.69.9+dfsg-2)

plotter for visualizing data

circos-tools (0.23-1)

plotter for visualizing data - helper utilities

ckon (0.7.1-5+b2)

automatic build tool for ROOT data analysis software

clearcut (1.0.9+git20211013.b799afe-1)

extremely efficient phylogenetic tree reconstruction

clonalframe (1.2-11+b2)

inference of bacterial microevolution using multilocus sequence data

clonalframeml (1.12-3)

Efficient Inference of Recombination in Whole Bacterial Genomes

clonalorigin (1.0-6+b2)

inference of homologous recombination in bacteria using whole genome sequences

clustalo (1.2.4-7)

General-purpose multiple sequence alignment program for proteins

clustalw (2.1+lgpl-7)

global multiple nucleotide or peptide sequence alignment

clustalx (2.1+lgpl-9)

Multiple alignment of nucleic acid and protein sequences (graphical interface)

cmor-tables (3.3-1.1)

MIP tables for the Climate Model Output Rewriter library

cmtk (3.3.1p2+dfsg-2+b1)

Computational Morphometry Toolkit

cnvkit (0.9.9-2+b1)

Copy number variant detection from targeted DNA sequencing

cod-tools (3.7.0+dfsg-1+b3)

tools for manipulating CIF format files

code-saturne (6.0.2-2)

General purpose Computational Fluid Dynamics (CFD) software

code-saturne-bin (6.0.2-2)

General purpose Computational Fluid Dynamics (CFD) software - binaries

code-saturne-data (6.0.2-2)

General purpose Computational Fluid Dynamics (CFD) software - data

code-saturne-include (6.0.2-2)

General purpose Computational Fluid Dynamics (CFD) software - includes

codonw (1.4.4-7)

Correspondence Analysis of Codon Usage

coinor-cbc (2.10.8+ds1-1)

Coin-or branch-and-cut mixed integer programming solver

coinor-clp (1.17.6-3)

Coin-or linear programming solver

coinor-csdp (6.2.0-4+b1)

Software package for semidefinite programming (binaries)

coinor-libbonmin4 (1.8.9-1)

COIN-OR mixed integer programming

coinor-libcbc3 (2.10.8+ds1-1)

Coin-or branch-and-cut mixed integer programming solver (shared libraries)

coinor-libcgl1 (0.60.3+repack1-4)

COIN-OR Cut Generation Library

coinor-libclp1 (1.17.6-3)

Coin-or linear programming solver (shared libraries)

coinor-libcoinutils3v5 (2.11.4+repack1-2)

Coin-or collection of utility classes (binaries and libraries)

coinor-libosi1v5 (0.108.6+repack1-2)

COIN-OR Open Solver Interface

coinor-libsymphony3 (5.6.17+dfsg-1+b1)

COIN-OR solver for mixed-integer linear programs (shared libraries)

coinor-libvol1 (1.5.4-4)

Coin-or linear programming solver (libraries)

coinor-symphony (5.6.17+dfsg-1+b1)

COIN-OR solver for mixed-integer linear programs

colmap (3.8-1)

Structure-from-Motion and Multi-View Stereo

comet-ms (2019015+cleaned1-3)

Tandem mass spectrometry (MS/MS) search engine

cpuinfo (0.0~git20220617.082deff-1+deb12u1)

CPU INFOrmation library (binary utilities)

gdal-bin (3.6.2+dfsg-1+b2)

Geospatial Data Abstraction Library - Utility programs

gdal-data (3.6.2+dfsg-1)

Geospatial Data Abstraction Library - Data files

gdal-plugins (3.6.2+dfsg-1+b2)

Geospatial Data Abstraction Library - Plugins

geotiff-bin (1.7.1-2+b1)

GeoTIFF (geografic enabled TIFF) library -- tools

hdf5-helpers (1.10.8+repack1-1)

HDF5 - Helper tools

hdf5-tools (1.10.8+repack1-1)

HDF5 - Runtime tools

hfst-ospell (0.5.3-1+b2)

Spell checker library and tool based on HFST

indi-dsi (0.4+20221223123028-1)

INDI driver for Meade DSI Pro I/II/III

kalzium (4:22.12.3-1)

periodic table and chemistry tools

kalzium-data (4:22.12.3-1)

data files for Kalzium

libadios-bin (1.13.1-31+b1)

ADIOS Adaptable IO system for simulations - binaries

libadios-examples (1.13.1-31)

Examples for the ADIOS Adaptable IO system

libatlas-ecmwf-utils (0.31.1-3)

Numerical weather prediction and climate modelling library - utilities

libball1.5-data (1.5.0+git20180813.37fc53c-11)

Biochemical Algorithms Library (data files)

libchemicaltagger-java (1.6.2-2)

tool for semantic text-mining in chemistry

libclhep2.1v5 (2.1.4.1+dfsg-1.1)

CLHEP: A Class Library for High Energy Physics

libhdf5-jni (1.10.8+repack1-1)

native library used by libhdf5-java

libinchi-bin (1.03+dfsg-4+b2 [amd64], 1.03+dfsg-4 [arm64])

International Chemical Identifier (InChI) algorithm (executable)

ncoils (2002-9)

coiled coil secondary structure prediction

netcdf-bin (1:4.9.0-3+b1)

Programs for reading and writing NetCDF files

octave-bart (0.8.00-3)

Octave bindings for BART

octave-biosig (2.5.0-1+b1)

Octave bindings for BioSig library

ogdi-bin (4.1.0+ds-6)

Open Geographic Datastore Interface Library -- utilities

openbabel (3.1.1+dfsg-9+b3)

Chemical toolbox utilities (cli)

openbabel-gui (3.1.1+dfsg-9+b3)

Chemical toolbox utilities (graphical user interface)

proj-bin (9.1.1-1+b1)

Cartographic projection library (tools)

python3-amp (0.6.1-1+b8)

Atomistic Machine-learning Package (python 3)

python3-bornagain (1.19.0-3+b5)

Simulate and fit X-ray and neutron GISAS -- Python3

python3-cif2cell (2.0.0a5+dfsg-1)

prepare CIF files for electronic structure calculations

step (4:22.12.3-1)

interactive physical simulator for KDE

ucx-utils (1.13.1-1)

Utilities for the UCX messaging library

z3 (4.8.12-3.1)

theorem prover from Microsoft Research