Pakiet: ssake (4.0.1-2)

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Strona internetowa [www.bcgsc.ca]

Podobne pakiety:

genomics application for assembling millions of very short DNA sequences

The Short Sequence Assembly by K-mer search and 3′ read Extension (SSAKE) is a genomics application for aggressively assembling millions of short nucleotide sequences by progressively searching for perfect 3′-most k-mers using a DNA prefix tree. SSAKE is designed to help leverage the information from short sequences reads by stringently clustering them into contigs that can be used to characterize novel sequencing targets.

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wymaga

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enhances

dep: libperl4-corelibs-perl

libraries historically supplied with Perl 4
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: python3

interactive high-level object-oriented language (default python3 version)

sug: ssake-examples

example data for SSAKE, a genomic assembler of short reads

Pobieranie ssake

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