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[ Fonte: megadepth ]
Pacote: megadepth (1.2.0-4 e outros)
Links para megadepth
Baixe o pacote-fonte megadepth:
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Fontes externas:
- Pagina principal [github.com]
Pacotes similares:
computes coverage from BigWig and BAM sequencing files
A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.
This package is a successor of the program 'bamcount'.
Outros pacotes relacionados a megadepth
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- dep: libbigwig0t64 (>= 0.4.6)
- C library for handling bigWig files
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
também um pacote virtual fornecido por libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- sug: r-bioc-megadepth
- BioCOnductor BigWig and BAM related utilities
Download de megadepth
| Arquitetura | Versão | Tamanho do pacote | Tamanho instalado | Arquivos |
|---|---|---|---|---|
| amd64 | 1.2.0-4+b1 | 81.0 kB | 275.0 kB | [lista de arquivos] |