Pacote: samtools (1.21-1)

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Pagina principal [www.htslib.org]

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processing sequence alignments in SAM, BAM and CRAM formats

Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server.

Outros pacotes relacionados a samtools

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dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
também um pacote virtual fornecido por libc6-udeb
dep: libhts3t64 (>= 1.21)

C library for high-throughput sequencing data formats
dep: libncurses6 (>= 6)

shared libraries for terminal handling
dep: libtinfo6 (>= 6)

shared low-level terminfo library for terminal handling
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

sug: cwltool

Common Workflow Language reference implementation

Download de samtools

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Arquitetura	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	651.5 kB	1,447.0 kB	[lista de arquivos]