Pacote: concavity (0.1+dfsg.1-6)

Links para concavity

Rastreador de patch eLxr

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Pagina principal [compbio.cs.princeton.edu]

Pacotes similares:

predictor of protein ligand binding sites from structure and conservation

ConCavity predicts protein ligand binding sites by combining evolutionary sequence conservation and 3D structure.

ConCavity takes as input a PDB format protein structure and optionally files that characterize the evolutionary sequence conservation of the chains in the structure file.

The following result files are produced by default:

 * Residue ligand binding predictions for each chain (*.scores).
 * Residue ligand binding predictions in a PDB format file (residue
   scores placed in the temp. factor field, *_residue.pdb).
 * Pocket prediction locations in a DX format file (*.dx).
 * PyMOL script to visualize the predictions (*.pml).

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dep: libc6 (>= 2.38)

GNU C Library: Shared libraries
também um pacote virtual fornecido por libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libstdc++6 (>= 5)

GNU Standard C++ Library v3

sug: conservation-code

protein sequence conservation scoring tool
sug: pymol

Molecular Graphics System

Download de concavity

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Arquitetura	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	238.3 kB	967.0 kB	[lista de arquivos]
arm64	229.2 kB	1,000.0 kB	[lista de arquivos]