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[ Zdroj: cnvkit ]
Balík: cnvkit (0.9.12-1)
Odkazy pre cnvkit
Stiahnuť zdrojový balík cnvkit:
Správcovia:
Externé zdroje:
- Domovská stránka [cnvkit.readthedocs.org]
Podobné balíky:
Copy number variant detection from targeted DNA sequencing
A command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from targeted DNA sequencing. It is designed for use with hybrid capture, including both whole-exome and custom target panels, and short-read sequencing platforms such as Illumina and Ion Torrent.
Ostatné balíky súvisiace s balíkom cnvkit
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab
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- dep: python3-numpy
- Python library for numerical computations (Python 3)
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- dep: python3-pandas
- data structures for "relational" or "labeled" data
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- dep: python3-pomegranate (>= 0.15)
- Fast, flexible and easy to use probabilistic modelling
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- dep: python3-pyfaidx
- efficient random access to fasta subsequences for Python 3
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-reportlab
- ReportLab library to create PDF documents using Python3
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: python3-sklearn
- Python modules for machine learning and data mining - Python 3
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- dep: r-bioc-dnacopy
- R package: DNA copy number data analysis
Stiahnuť cnvkit
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| all | 19,402.3 kB | 94,677.0 kB | [zoznam súborov] |