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[ Källkod: bio-eagle ]
Paket: bio-eagle (2.4.1-3 och andra)
Länkar för bio-eagle
Hämta källkodspaketet bio-eagle:
Ansvariga:
Externa resurser:
- Hemsida [data.broadinstitute.org]
Liknande paket:
Haplotype phasing within a genotyped cohort or using a phased reference panel
Eagle estimates haplotype phase either within a genotyped cohort or using a phased reference panel. The basic idea of the Eagle1 algorithm is to harness identity-by-descent among distant relatives—which is pervasive at very large sample sizes but rare among smaller numbers of samples—to rapidly call phase using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a full probabilistic model similar to the diploid Li-Stephens model used by previous HMM-based methods.
Please note: The executable was renamed to bio-eagle because of a name clash. Please read more about this in /usr/share/doc/bio-eagle/README.Debian.
Andra paket besläktade med bio-eagle
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- dep: libboost-iostreams1.74.0 (>= 1.74.0)
- Boost.Iostreams Library
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- dep: libboost-program-options1.74.0 (>= 1.74.0)
- program options library for C++
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
också ett virtuellt paket som tillhandahålls av libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: libhts3 (>= 1.10)
- Paketet inte tillgängligt
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- dep: libopenblas0
- Optimized BLAS (linear algebra) library (meta)
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- rec: med-config (>= 2.1)
- Paketet inte tillgängligt
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- sug: bio-eagle-examples
- Examples for bio-eagle
Hämta bio-eagle
| Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|---|
| amd64 | 2.4.1-3+b1 | 218,8 kbyte | 619,0 kbyte | [filförteckning] |