eLxr packages软件包：python3-freecontact（1.1-9 以及其他的）
python3-freecontact 的相关链接
下载源码包 python-freecontact：
- [python-freecontact_1.1-9.debian.tar.xz]
- [python-freecontact_1.1-9.dsc]
- [python-freecontact_1.1.orig.tar.gz]
维护小组：
外部的资源：
- 主页 [rostlab.org]
相似软件包：
fast protein contact predictor - binding for Python3
FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011).
FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible.
A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example.
This package contains the Python3 binding.
其他与 python3-freecontact 有关的软件包
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- dep: libboost-python1.83.0 (>= 1.83.0)
- Boost.Python Library
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- dep: libboost-python1.83.0-py313
- 本虚包由这些包填实： libboost-python1.83.0
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- dep: libc6 (>= 2.32)
- GNU C Library: Shared libraries
同时作为一个虚包由这些包填实： libc6-udeb
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- dep: libfreecontact0t64 (>= 1.0.21)
- fast protein contact predictor library
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: python3 (<< 3.14)
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (>= 3.13~)