Paquet : iqtree (2.0.7+dfsg-1 et autres)

Liens pour iqtree

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Ressources externes :

Page d'accueil [www.cibiv.at]

Paquets similaires :

efficient phylogenetic software by maximum likelihood

IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others:

 * A novel fast and effective stochastic algorithm to estimate maximum
   likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms
   of likelihood while requiring similar amount of computing time (see
   Nguyen et al., 2015)
 * An ultrafast bootstrap approximation to assess branch supports (see
   Minh et al., 2013).
 * A wide range of substitution models for binary, DNA, protein, codon,
   and morphological alignments.
 * Ultrafast model selection for all data types, 10 to 100 times faster
   than jModelTest and ProtTest.
 * Finding best partition scheme like PartitionFinder.
 * Partitioned models with mixed data types for phylogenomic (multi-
   gene) alignments, allowing for separate, proportional, or joint
   branch lengths among genes.
 * Supporting the phylogenetic likelihod library (PLL) (see Flouri et
   al., 2014)

Autres paquets associés à iqtree

dépendances

recommandations

suggestions

enhances

dep: libc6 (>= 2.38)

GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
dep: libgcc-s1 (>= 4.0)

GCC support library
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libopenmpi40 (>= 5.0.6)

high performance message passing library -- shared library
dep: libstdc++6 (>= 14)

GNU Standard C++ Library v3
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

Télécharger iqtree

Télécharger pour toutes les architectures proposées
Architecture	Version	Taille du paquet	Espace occupé une fois installé	Fichiers
amd64	2.0.7+dfsg-1+b2	3 566,8 ko	25 632,0 ko	[liste des fichiers]