eLxr packages [ bianca ]
[ Paquet source : bitseq ]
Paquet : bitseq (0.7.5+dfsg-6 et autres)
Liens pour bitseq
Télécharger le paquet source bitseq :
Responsables :
Ressources externes :
- Page d'accueil [github.com]
Paquets similaires :
Bayesian Inference of Transcripts from Sequencing Data
BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.
Autres paquets associés à bitseq
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- dep: libc6 (>= 2.29) [amd64]
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
- dep: libc6 (>= 2.38) [arm64]
-
- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 4.2) [arm64]
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: libstdc++6 (>= 11) [arm64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 5.2) [amd64]
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-numpy
- Python library for numerical computations (Python 3)
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- dep: zlib1g (>= 1:1.2.3.3)
- compression library - runtime
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- sug: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
Télécharger bitseq
| Architecture | Version | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|---|
| amd64 | 0.7.5+dfsg-6 | 337,2 ko | 1 927,0 ko | [liste des fichiers] |
| arm64 | 0.7.5+dfsg-6+b2 | 305,6 ko | 2 216,0 ko | [liste des fichiers] |