eLxr packages [ bianca ]
[ Источник: bitseq ]
Пакет: bitseq (0.7.5+dfsg-6 и другие)
Ссылки для bitseq
Исходный код bitseq:
Сопровождающие:
Внешние ресурсы:
- Сайт [github.com]
Подобные пакеты:
Bayesian Inference of Transcripts from Sequencing Data
BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.
Другие пакеты, относящиеся к bitseq
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- dep: libc6 (>= 2.29) [amd64]
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
- dep: libc6 (>= 2.38) [arm64]
-
- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 4.2) [arm64]
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: libstdc++6 (>= 11) [arm64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 5.2) [amd64]
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-numpy
- Python library for numerical computations (Python 3)
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- dep: zlib1g (>= 1:1.2.3.3)
- compression library - runtime
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- sug: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
Загрузка bitseq
| Архитектура | Версия | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|---|
| amd64 | 0.7.5+dfsg-6 | 337,2 Кб | 1 927,0 Кб | [список файлов] |
| arm64 | 0.7.5+dfsg-6+b2 | 305,6 Кб | 2 216,0 Кб | [список файлов] |