Paquet : blixem (4.44.1+dfsg-7.1 et autres)

Liens pour blixem

Suivis des correctifs pour eLxr

Télécharger le paquet source seqtools :

Responsables :

Ressources externes :

Page d'accueil [www.sanger.ac.uk]

Paquets similaires :

interactive browser of sequence alignments

Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.

 * Overview section showing the positions of genes and alignments around
   the alignment window
 * Detail section showing the actual alignment of protein or nucleotide
   sequences to the genomic DNA sequence.
 * View alignments against both strands of the reference sequence.
 * View sequences in nucleotide or protein mode; in protein mode, Blixem
   will display the three-frame translation of the reference sequence.
 * Residues are highlighted in different colours depending on whether
   they are an exact match, conserved substitution or mismatch.
 * Gapped alignments are supported, with insertions and deletions being
   highlighted in the match sequence.
 * Matches can be sorted and filtered.
 * SNPs and other variations can be highlighted in the reference
   sequence.
 * Poly(A) tails can be displayed and poly(A) signals highlighted in the
   reference sequence.

Autres paquets associés à blixem

dépendances

recommandations

suggestions

enhances

dep: libc6 (>= 2.38)

GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
dep: libcairo2 (>= 1.2.4)

Cairo 2D vector graphics library
dep: libcurl4t64 (>= 7.16.2)

easy-to-use client-side URL transfer library (OpenSSL flavour)
dep: libgbtools0t64 (>= 4.44.1+dfsg)

library for visualising sequence alignments
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libglib2.0-0t64 (>= 2.76.0)

GLib library of C routines
dep: libgtk2.0-0t64 (>= 2.14.0)

GTK graphical user interface library - old version
dep: libpango-1.0-0 (>= 1.14.0)

Layout and rendering of internationalized text
dep: libsqlite3-0 (>= 3.5.9)

SQLite 3 shared library
dep: libstdc++6 (>= 5.2)

GNU Standard C++ Library v3

Télécharger blixem

Télécharger pour toutes les architectures proposées
Architecture	Version	Taille du paquet	Espace occupé une fois installé	Fichiers
amd64	4.44.1+dfsg-7.1+b3	1 348,6 ko	2 220,0 ko	[liste des fichiers]
arm64	4.44.1+dfsg-7.1+b3	1 312,6 ko	2 292,0 ko	[liste des fichiers]