eLxr packages [ bianca ]
[ Источник: seqtools ]
Пакет: blixem (4.44.1+dfsg-7.1 и другие)
Ссылки для blixem
Исходный код seqtools:
- [seqtools_4.44.1+dfsg-7.1.debian.tar.xz]
- [seqtools_4.44.1+dfsg-7.1.dsc]
- [seqtools_4.44.1+dfsg.orig.tar.xz]
Сопровождающие:
Внешние ресурсы:
- Сайт [www.sanger.ac.uk]
Подобные пакеты:
interactive browser of sequence alignments
Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.
* Overview section showing the positions of genes and alignments around the alignment window * Detail section showing the actual alignment of protein or nucleotide sequences to the genomic DNA sequence. * View alignments against both strands of the reference sequence. * View sequences in nucleotide or protein mode; in protein mode, Blixem will display the three-frame translation of the reference sequence. * Residues are highlighted in different colours depending on whether they are an exact match, conserved substitution or mismatch. * Gapped alignments are supported, with insertions and deletions being highlighted in the match sequence. * Matches can be sorted and filtered. * SNPs and other variations can be highlighted in the reference sequence. * Poly(A) tails can be displayed and poly(A) signals highlighted in the reference sequence.
Другие пакеты, относящиеся к blixem
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- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
-
- dep: libcairo2 (>= 1.2.4)
- Cairo 2D vector graphics library
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- dep: libcurl4t64 (>= 7.16.2)
- easy-to-use client-side URL transfer library (OpenSSL flavour)
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- dep: libgbtools0t64 (>= 4.44.1+dfsg)
- library for visualising sequence alignments
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libglib2.0-0t64 (>= 2.76.0)
- GLib library of C routines
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- dep: libgtk2.0-0t64 (>= 2.14.0)
- GTK graphical user interface library - old version
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- dep: libpango-1.0-0 (>= 1.14.0)
- Layout and rendering of internationalized text
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- dep: libsqlite3-0 (>= 3.5.9)
- SQLite 3 shared library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
Загрузка blixem
| Архитектура | Версия | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|---|
| amd64 | 4.44.1+dfsg-7.1+b3 | 1 348,6 Кб | 2 220,0 Кб | [список файлов] |
| arm64 | 4.44.1+dfsg-7.1+b3 | 1 312,6 Кб | 2 292,0 Кб | [список файлов] |