eLxr packages [ bianca ]
[ Paquet source : unifrac-tools ]
Paquet : unifrac-tools (1.4-3 et autres)
Liens pour unifrac-tools
Télécharger le paquet source unifrac-tools :
Responsables :
Ressources externes :
- Page d'accueil [github.com]
Paquets similaires :
high-performance phylogenetic diversity calculations (binaries)
The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.
This package contains target binaries ssu and faithpd
Autres paquets associés à unifrac-tools
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- ou libblas.so.3
- paquet virtuel fourni par libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libc6 (>= 2.38)
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un paquet virtuel est également fourni par libc6-udeb
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- dep: libgcc-s1 (>= 11) [arm64]
- GCC support library
- dep: libgcc-s1 (>= 12) [amd64]
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: liblapacke (>= 3.12.0)
- Library of linear algebra routines 3 - C lib shared version
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- dep: liblz4-1 (>= 0.0~r130)
- Fast LZ compression algorithm library - runtime
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- dep: libssl3t64 (>= 3.0.0)
- Secure Sockets Layer toolkit - shared libraries
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- dep: libssu0
- high-performance phylogenetic diversity calculations (lib)
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- dep: libstdc++6 (>= 14)
- GNU Standard C++ Library v3
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- dep: libsz2 (>= 1.1.3)
- Adaptive Entropy Coding library - SZIP
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- dep: zlib1g (>= 1:1.2.0)
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Télécharger unifrac-tools
| Architecture | Version | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|---|
| amd64 | 1.4-3+b4 | 1 738,8 ko | 8 540,0 ko | [liste des fichiers] |
| arm64 | 1.4-3+b4 | 1 506,4 ko | 9 077,0 ko | [liste des fichiers] |