eLxr packages [ bianca ]
[ Source: unifrac-tools ]
Пакунок: unifrac-tools (1.4-3 and others)
Links for unifrac-tools
Download Source Package unifrac-tools:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
high-performance phylogenetic diversity calculations (binaries)
The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.
This package contains target binaries ssu and faithpd
Інші пакунки пов'язані з unifrac-tools
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- or libblas.so.3
- virtual package provided by libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libcurl4t64 (>= 7.16.2)
- easy-to-use client-side URL transfer library (OpenSSL flavour)
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- dep: libgcc-s1 (>= 11) [arm64]
- GCC support library
- dep: libgcc-s1 (>= 12) [amd64]
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: liblapacke (>= 3.12.0)
- Library of linear algebra routines 3 - C lib shared version
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- dep: liblz4-1 (>= 0.0~r130)
- Fast LZ compression algorithm library - runtime
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- dep: libssl3t64 (>= 3.0.0)
- Secure Sockets Layer toolkit - shared libraries
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- dep: libssu0
- high-performance phylogenetic diversity calculations (lib)
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- dep: libstdc++6 (>= 14)
- GNU Standard C++ Library v3
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- dep: libsz2 (>= 1.1.3)
- Adaptive Entropy Coding library - SZIP
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- dep: zlib1g (>= 1:1.2.0)
- compression library - runtime
Завантажити unifrac-tools
| Архітектура | Версія | Розмір пакунка | Розмір після встановлення | Файли |
|---|---|---|---|---|
| amd64 | 1.4-3+b4 | 1,738.8 kB | 8,540.0 kB | [список файлів] |
| arm64 | 1.4-3+b4 | 1,506.4 kB | 9,077.0 kB | [список файлів] |