eLxr packages [ bianca ]
[ Source: twopaco ]
Package: twopaco (1.0.0+dfsg-1 and others)
Links for twopaco
Download Source Package twopaco:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
build the compacted de Bruijn graph from many complete genomes
TwoPaCo is an implementation of the algorithm described in the paper "TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes".
This package contains two programs:
twopaco: tool for direct construction of the compressed graph from
multiple complete genomes
graphdump: utility that turns output of twopaco into a text format
Other Packages Related to twopaco
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libstdc++6 (>= 11) [amd64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 14) [arm64]
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- dep: libtbb12 (>= 2021.12.0) [arm64]
- parallelism library for C++ - runtime files
- dep: libtbb12 (>= 2021.4.0) [amd64]
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- dep: libtbbmalloc2 (>= 2017~U7) [amd64]
- parallelism helper library for C++ - runtime files
- dep: libtbbmalloc2 (>= 2021.12.0) [arm64]
Download twopaco
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| amd64 | 1.0.0+dfsg-1 | 379.3 kB | 1,616.0 kB | [list of files] |
| arm64 | 1.0.0+dfsg-1+b1 | 352.7 kB | 1,589.0 kB | [list of files] |