eLxr packages [ bianca ]
[ ソース: twopaco ]
パッケージ: twopaco (1.0.0+dfsg-1 など)
build the compacted de Bruijn graph from many complete genomes
TwoPaCo is an implementation of the algorithm described in the paper "TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes".
This package contains two programs:
twopaco: tool for direct construction of the compressed graph from
multiple complete genomes
graphdump: utility that turns output of twopaco into a text format
その他の twopaco 関連パッケージ
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libstdc++6 (>= 11) [amd64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 14) [arm64]
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- dep: libtbb12 (>= 2021.12.0) [arm64]
- parallelism library for C++ - runtime files
- dep: libtbb12 (>= 2021.4.0) [amd64]
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- dep: libtbbmalloc2 (>= 2017~U7) [amd64]
- parallelism helper library for C++ - runtime files
- dep: libtbbmalloc2 (>= 2021.12.0) [arm64]