eLxr packages [ bianca ]
[ Источник: provean ]
Пакет: provean (1.1.5+ds-5)
Ссылки для provean
Исходный код provean:
Сопровождающие:
Внешние ресурсы:
- Сайт [provean.jcvi.org]
Подобные пакеты:
Protein Variation Effect Analyzer
PROVEAN (Protein Variation Effect Analyzer) is a software tool which predicts whether an amino acid substitution or indel has an impact on the biological function of a protein.
PROVEAN is useful for filtering sequence variants to identify nonsynonymous or indel variants that are predicted to be functionally important.
The performance of PROVEAN is comparable to popular tools such as SIFT or PolyPhen-2.
A fast computation approach to obtain pairwise sequence alignment scores enabled the generation of precomputed PROVEAN predictions for 20 single AA substitutions and a single AA deletion at every amino acid position of all protein sequences in human and mouse.
Другие пакеты, относящиеся к provean
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- dep: cd-hit
- suite of programs designed to quickly group sequences
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- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: ncbi-blast+
- next generation suite of BLAST sequence search tools
Загрузка provean
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| amd64 | 51,1 Кб | 149,0 Кб | [список файлов] |
| arm64 | 44,8 Кб | 153,0 Кб | [список файлов] |