eLxr packages [ bianca ]
[ Zdroj: mash ]
Balík: mash (2.3+dfsg-6 a iné)
Odkazy pre mash
Stiahnuť zdrojový balík mash:
Správcovia:
Externé zdroje:
- Domovská stránka [mash.readthedocs.io]
Podobné balíky:
fast genome and metagenome distance estimation using MinHash
Mash uses MinHash locality-sensitive hashing to reduce large biosequences to a representative sketch and rapidly estimate pairwise distances between genomes or metagenomes. Mash sketch databases effectively delineate known species boundaries, allow construction of approximate phylogenies, and can be searched in seconds using assembled genomes or raw sequencing runs from Illumina, Pacific Biosciences, and Oxford Nanopore. For metagenomics, Mash scales to thousands of samples and can replicate Human Microbiome Project and Global Ocean Survey results in a fraction of the time.
Ostatné balíky súvisiace s balíkom mash
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
tiež virtuálny balík poskytovaný balíkom libc6-udeb
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- dep: libcapnp-1.1.0
- Cap'n Proto C++ library
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libgsl28 (>= 2.8+dfsg)
- GNU Scientific Library (GSL) -- library package
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- dep: libmurmurhash2 (>= 0.2)
- Portable MurmurHash Implementation
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Stiahnuť mash
| Architektúra | Verzia | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|---|
| amd64 | 2.3+dfsg-6+b2 | 187.5 kB | 538.0 kB | [zoznam súborov] |
| arm64 | 2.3+dfsg-6+b2 | 165.3 kB | 490.0 kB | [zoznam súborov] |