Paket: maq (0.7.1-10)

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Hemsida [maq.sourceforge.net]

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maps short fixed-length polymorphic DNA sequence reads to reference sequences

Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2.

Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.

Andra paket besläktade med maq

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rekommenderar

föreslår

enhances

dep: libc6 (>= 2.38)

GNU C Library: Shared libraries
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libgcc-s1 (>= 4.2) [arm64]

GCC support library
dep: libstdc++6 (>= 5)

GNU Standard C++ Library v3
dep: zlib1g (>= 1:1.2.3.3)

compression library - runtime

sug: bwa

Burrows-Wheeler Aligner
sug: samtools

processing sequence alignments in SAM, BAM and CRAM formats

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Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	295,1 kbyte	545,0 kbyte	[filförteckning]
arm64	287,3 kbyte	581,0 kbyte	[filförteckning]