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[ Quellcode: ampliconnoise ]
Paket: ampliconnoise (1.29-15 und andere)
Links für ampliconnoise
Quellcode-Paket ampliconnoise herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
Andere Pakete mit Bezug zu ampliconnoise
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libgsl28 (>= 2.8+dfsg)
- GNU Scientific Library (GSL) -- library package
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- dep: libopenmpi40 (>= 5.0.6)
- high performance message passing library -- shared library
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- dep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- rec: mpi-default-bin
- Standard MPI runtime programs (metapackage)
ampliconnoise herunterladen
| Architektur | Version | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|---|
| amd64 | 1.29-15+b1 | 1.084,5 kB | 2.052,0 kB | [Liste der Dateien] |
| arm64 | 1.29-15+b1 | 1.073,3 kB | 2.400,0 kB | [Liste der Dateien] |