Paketti: ampliconnoise (1.29-15 ja muut)

Links for ampliconnoise

eLxr Patch Tracker

Imuroi lähdekoodipaketti ampliconnoise:

Ylläpitäjät:

External Resources:

Kotisivu [github.com]

Samankaltaisia paketteja:

removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Muut pakettiin ampliconnoise liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgsl28 (>= 2.8+dfsg)

GNU Scientific Library (GSL) -- library package
dep: libopenmpi40 (>= 5.0.6)

high performance message passing library -- shared library
dep: mafft

Multiple alignment program for amino acid or nucleotide sequences

rec: mpi-default-bin

Standard MPI runtime programs (metapackage)

Imuroi ampliconnoise

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	1.29-15+b1	1,084.5 kt	2,052.0 kt	[tiedostoluettelo]
arm64	1.29-15+b1	1,073.3 kt	2,400.0 kt	[tiedostoluettelo]