Paket: ampliconnoise (1.29-15 och andra)

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Hemsida [github.com]

Liknande paket:

removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Andra paket besläktade med ampliconnoise

beror

rekommenderar

föreslår

enhances

dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libgsl28 (>= 2.8+dfsg)

GNU Scientific Library (GSL) -- library package
dep: libopenmpi40 (>= 5.0.6)

high performance message passing library -- shared library
dep: mafft

Multiple alignment program for amino acid or nucleotide sequences

rec: mpi-default-bin

Standard MPI runtime programs (metapackage)

Hämta ampliconnoise

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
amd64	1.29-15+b1	1.084,5 kbyte	2.052,0 kbyte	[filförteckning]
arm64	1.29-15+b1	1.073,3 kbyte	2.400,0 kbyte	[filförteckning]