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[ Source: cnvkit ]
Paketti: cnvkit (0.9.9-2 ja muut)
Links for cnvkit
Imuroi lähdekoodipaketti cnvkit:
Ylläpitäjät:
External Resources:
- Kotisivu [cnvkit.readthedocs.org]
Samankaltaisia paketteja:
Copy number variant detection from targeted DNA sequencing
A command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from targeted DNA sequencing. It is designed for use with hybrid capture, including both whole-exome and custom target panels, and short-read sequencing platforms such as Illumina and Ion Torrent.
Muut pakettiin cnvkit liittyvät paketit
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Paketti ei saatavilla
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- dep: python3-joblib
- tools to provide lightweight pipelining in Python
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- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
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- dep: python3-networkx
- tool to create, manipulate and study complex networks (Python3)
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pandas
- Paketti ei saatavilla
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- dep: python3-pomegranate
- Paketti ei saatavilla
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- dep: python3-pyfaidx
- Paketti ei saatavilla
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- dep: python3-pysam
- Paketti ei saatavilla
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- dep: python3-reportlab
- ReportLab library to create PDF documents using Python3
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: python3-sklearn
- Python modules for machine learning and data mining - Python 3
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- dep: r-bioc-dnacopy
- Paketti ei saatavilla
Imuroi cnvkit
| Arkkitehtuuri | Versio | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|---|
| amd64 | 0.9.9-2+b1 | 15,064.0 kt | 69,065.0 kt | [tiedostoluettelo] |