eLxr packages [ aria ]
[ bianca ]
[ 原始碼： cnvkit ]
套件：cnvkit（0.9.9-2 以及其他的）
Copy number variant detection from targeted DNA sequencing
A command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from targeted DNA sequencing. It is designed for use with hybrid capture, including both whole-exome and custom target panels, and short-read sequencing platforms such as Illumina and Ion Torrent.
其他與 cnvkit 有關的套件
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- 套件暫時不可用
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- dep: python3-joblib
- tools to provide lightweight pipelining in Python
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- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
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- dep: python3-networkx
- tool to create, manipulate and study complex networks (Python3)
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pandas
- 套件暫時不可用
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- dep: python3-pomegranate
- 套件暫時不可用
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- dep: python3-pyfaidx
- 套件暫時不可用
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- dep: python3-pysam
- 套件暫時不可用
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- dep: python3-reportlab
- ReportLab library to create PDF documents using Python3
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: python3-sklearn
- Python modules for machine learning and data mining - Python 3
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- dep: r-bioc-dnacopy
- 套件暫時不可用