eLxr packages [ bianca ]
[ Source: abyss ]
Paketti: abyss (2.3.10-1 ja muut)
Links for abyss
Imuroi lähdekoodipaketti abyss:
Ylläpitäjät:
External Resources:
- Kotisivu [github.com]
Samankaltaisia paketteja:
de novo, parallel, sequence assembler for short reads
ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.
Muut pakettiin abyss liittyvät paketit
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- dep: bsdextrautils
- extra utilities from 4.4BSD-Lite
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- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: libopenmpi40 (>= 5.0.6)
- high performance message passing library -- shared library
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- dep: libsqlite3-0 (>= 3.5.9)
- SQLite 3 shared library
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- dep: libstdc++6 (>= 14)
- GNU Standard C++ Library v3
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- dep: make
- utility for directing compilation
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- dep: openmpi-bin
- high performance message passing library -- binaries
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- dep: openmpi-common
- high performance message passing library -- common files
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
Imuroi abyss
| Arkkitehtuuri | Versio | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|---|
| amd64 | 2.3.10-1+b1 | 3,246.5 kt | 10,021.0 kt | [tiedostoluettelo] |