Paquet : boxshade (3.3.1-14 et autres)

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Pretty-printing of multiple sequence alignments

Boxshade is a program for creating good looking printouts from multiple-aligned protein or DNA sequences. The program does not perform the alignment by itself and requires as input a file that was created by a multiple alignment program or manually edited with respective tools.

Boxshade reads multiple-aligned sequences from either PILEUP-MSF, CLUSTAL-ALN, MALIGNED-data and ESEE-save files (limited to a maximum of 150 sequences with up to 10000 elements each). Various kinds of shading can be applied to identical/similar residues. Output is written to screen or to a file in the following formats: ANSI/VT100, PS/EPS, RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML

Autres paquets associés à boxshade

dépendances

recommandations

suggestions

enhances

dep: libc6 (>= 2.14) [amd64]

GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb

dep: libc6 (>= 2.34) [arm64]

sug: kalign

Global and progressive multiple sequence alignment

ou clustalw

global multiple nucleotide or peptide sequence alignment

ou mafft

Multiple alignment program for amino acid or nucleotide sequences

ou hmmer

profile hidden Markov models for protein sequence analysis
sug: seaview

Multiplatform interface for sequence alignment and phylogeny
sug: texlive-latex-extra

TeX Live: LaTeX additional packages
sug: xfig

Facility for Interactive Generation of figures under X11

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Télécharger pour toutes les architectures proposées
Architecture	Version	Taille du paquet	Espace occupé une fois installé	Fichiers
amd64	3.3.1-14	54,5 ko	161,0 ko	[liste des fichiers]
arm64	3.3.1-14+b1	50,4 ko	192,0 ko	[liste des fichiers]