eLxr packages [ bianca ]
[ ソース: seqan-raptor ]
パッケージ: seqan-raptor (3.0.1+ds-9)
seqan-raptor に関するリンク
seqan-raptor ソースパッケージをダウンロード:
- [seqan-raptor_3.0.1+ds-9.debian.tar.xz]
- [seqan-raptor_3.0.1+ds-9.dsc]
- [seqan-raptor_3.0.1+ds.orig.tar.xz]
メンテナ:
外部の資源:
- ホームページ [github.com]
類似のパッケージ:
pre-filter for querying very large collections of nucleotide sequences
Raptor is a system for approximately searching many queries such as next-generation sequencing reads or transcripts in large collections of nucleotide sequences. Raptor uses winnowing minimizers to define a set of representative k-mers, an extension of the interleaved Bloom filters (IBFs) as a set membership data structure and probabilistic thresholding for minimizers. This approach allows compression and partitioning of the IBF to enable the effective use of secondary memory.
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