Pacote: bitseq (0.7.5+dfsg-6)

Links para bitseq

Rastreador de patch eLxr

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Pagina principal [github.com]

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Bayesian Inference of Transcripts from Sequencing Data

BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.

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dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
também um pacote virtual fornecido por libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libstdc++6 (>= 5.2)

GNU Standard C++ Library v3
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-numpy

Python library for numerical computations (Python 3)
dep: zlib1g (>= 1:1.2.3.3)

compression library - runtime

sug: samtools

processing sequence alignments in SAM, BAM and CRAM formats

Download de bitseq

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Arquitetura	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	337.2 kB	1,927.0 kB	[lista de arquivos]